Publications

2021

Pre-storage nitric oxide treatment enhances chilling tolerance of zucchini fruit (Cucurbita pepo L.) by S- nitrosylation of proteins and modulation of the antioxidant response. Raquel Jiménez-Muñoz, Francisco Palma, Fátima Carvajal, Alejando Castro-Cegrí, Amada Pulido, Manuel Jamilena, María del Carmen Romero-Puertas & Dolores Garrido. Postharvest Biology and Technology. 171: 111345. doi: 10.1016/j.postharvbio.2020.111345

Ground cover presence in organic olive orchards affects the interaction of natural enemies against Prays oleae, promoting an effective egg predation. Hugo Álvarez, Raquel Jiménez-Muñoz, Marina Morente, Mercedes Campos, Francisca Ruano. Agriculture, Ecosystems & Environment. 315: 107441. doi: 10.1016/j.agee.2021.107441

Changes in Morphology, Metabolism and Composition of Cuticular Wax in Zucchini Fruit During Postharvest Cold Storage. Fátima Carvajal, Alejando Castro-Cegrí, Raquel Jiménez-Muñoz, Manuel Jamilena, Dolores Garrido, Francisco Palma. Frontiers in plant science. 12: 778745. doi: 10.3389/fpls.2021.778745

Genome editing by CRISPR/Cas9 in polyploids. Carlos Sánchez-Gómez, David Posé, Carmen Martín-Pizarro. Poliploidy, Methods in Molecular Biology. In press.

The NAC transcription factor FaRIF controls fruit ripening in strawberry. Carmen Martín-Pizarro, José G. Vallarino, Sonia Osorio, Victoriano Meco, María Urrutia, Jeremy Pillet, Ana Casañal, Catharina Merchante, Iraida Amaya, Lothar Willmitzer, Alisdair R Fernie, James J. Giovannoni, Miguel A. Botella, Victoriano Valpuesta, David Posé. The Plant Cell. 33(5):1574-1593. doi: 10.1093/plcell/koab070.

2020

Allelic variation of MYB10 is the major force controlling natural variation in skin and flesh color in strawberry (Fragaria spp.) fruit. Cristina Castillejo, Veronika Waurich, Henning Wagner, Rubén Ramos, Nicolás Oiza, Pilar Muñoz, Juan C. Triviño, Julie Caruana, Zhongchi Liu, Nicolás Cobo, Michael A. Hardigan, Steven J. Knapp, José G. Vallarino, Sonia Osorio, Carmen Martín-Pizarro, David Posé, Tuomas Toivainen, Timo Hytönen, Youngjae Oh, Christopher R. Barbey, Vance M. Whitaker, Seonghee Lee, Klaus Olbricht, José F. Sánchez-Sevilla, Iraida Amaya. The Plant Cell. 32(12):3723-3749. doi: 10.1105/tpc.20.00474.

Characterizing the involvement of FaMADS9 in the regulation of strawberry fruit receptacle development. José G. Vallarino, Catharina Merchante, José F. Sánchez-Sevilla, María Angels de Luis Balaguer, Delphine M. Pott, María T. Ariza, Ana Casañal, David Posé, Amalia Vioque, Iraida Amaya, Lothar Willmitzer, Roberto Solano, Rosangela Sozzani, Alisdair R. Fernie, Miguel A. Botella, James J. Giovannoni, Victoriano Valpuesta, Sonia Osorio. Plant Biotechnology Journal. 18(4):929-943. doi: 10.1111/pbi.13257.

2019

Functional Analysis of the TM6 MADS box gene in the Octoploid Strawberry by CRISPR/Cas9-directed mutagenesis. Carmen Martín-Pizarro, Juan Carlos Triviño, David Posé. Journal of Experimental Botany. 70(3):949-961. doi: 10.1093/jxb/ery400.

Exogenous ɣ-aminobutyric acid treatment improves the cold tolerance of zucchini fruit during postharvest storage. Francisco Palma, Fátima Carvajal, Raquel Jiménez-Muñoz, Amada Pulido, Manuel Jamilena, Dolores Garrido. Plant Physiology and Biochemistry. 136: 188-195. doi: 10.1016/j.plaphy.2019.01.023

 

2018

Genome Editing as a Tool for Fruit Ripening Manipulation. Carmen Martín-Pizarro, David Posé. Frontiers in Plant Science. 9:1415. doi: 10.3389/fpls.2018.01415.

2017

Gene expression atlas of fruit ripening and transcriptome assembly from RNA-seq data in octoploid strawberry (Fragaria . José F. Sánchez-Sevilla, José G. Vallarino, Sonia Osorio, Aureliano Bombarely, David Posé, Catharina Merchante, Miguel A. Botella, Iraida Amaya, Victoriano Valpuesta. Scientific Reports. 7(1):13737. doi: 10.1038/s41598-017-14239-6.

Unravelling the role of abscisic acid in chilling tolerance of zucchini during postharvest cold storage. Fátima Carvajal, Francisco Palma, Raquel Jiménez-Muñoz, Manuel Jamilena, Amada Pulido, Dolores Garrido. Postharvest Biology and Technology. 133: 26-35. doi: 10.1016/j.postharvbio.2017.07.004.

2016

Changes in the biosynthesis of cuticular waxes during postharvest cold storage of zucchini fruit (Cucurbita pepo L.). Fátima Carvajal, Francisco Palma, Raquel Jiménez-Muñoz, Amada Pulido, Dolores Garrido. Acta Horticulturae.  1: 1475-1480. ISBN:10.17660/ActaHortic.2018.1194.206

Preconditioning treatment induces changes in plasma membrane lipid composition and vanadate-sensitive ATPase activity of zucchini fruit during cold storage. Francisco Palma, Fátima Carvajal, Raquel Jiménez-Muñoz, Amada Pulido, Dolores Garrido.  Acta Horticulturae. 19: 1467-1474. ISBN:10.17660/ActaHortic.2018.1194.205.

 

 

Other publications from the members of the group:

David Posé

2019

TTL proteins scaffold brassinosteroid signaling components at the plasma membrane to optimize signal transduction in Arabidopsis. Vítor Amorim-Silva, Álvaro García-Moreno, Araceli G. Castillo, Naoufal Lakhssassi, Alicia Esteban del Valle, Jessica Pérez-Sancho, Yansha Li, David Posé, Josefa Pérez-Rodríguez, Jinxing Lin, Victoriano Valpuesta, Omar Borsani, Cyril Zipfel, Alberto P. Macho, Miguel A. Botella. The Plant Cell. 31(8):1807-1828. doi: 10.1105/tpc.19.00150.

2017

Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering. Yuan You, Aneta Sawikowska, Manuela Neumann, David Posé, Giovanna Capovilla, Tobias Langenecker, Richard A. Neher, Paweł Krajewski, Markus Schmid. Nature Communications. 8:15120. doi: 10.1038/ncomms15120.

Dynamics of H3K4me3 Chromatin Marks Prevails over H3K27me3 for Gene Regulation during Flower Morphogenesis in Arabidopsis thaliana. Julia Engelhorn, Robert Blanvillain, Christian Kröner, Hugues Parrinello, Marine Rohmer, David Posé, Felix Ott, Markus Schmid, Cristel C. Carles. Epigenomes. 1(2), 8. doi: 10.3390/epigenomes1020008.

2016

A SAM oligomerization domain shapes the genomic binding landscape of the LEAFY transcription factor. Camille Sayou, Max H. Nanao, Marc Jamin, David Posé, Emmanuel Thévenon, Laura Grégoire, Gabrielle Tichtinsky, Gre ́goire Denay, Felix Ott, Marta Peirats Llobet, Markus Schmid, Renaud Dumas, François Parcy. Nature Communications. 7:11222. Doi: 10.1038/ncomms11222.

DNA-Binding factor target identification by chromatin Immunoprecipitation (ChIP) in plants. David Posé* and Levi Yant. Plant Signal Transduction: Methods and Protocols, Methods in Molecular Biology. Chapter 3. Vol. 1363. doi: 10.1007/978-1-4939-3115-6_3.

2015

A Quantitative and Dynamic Model of the Arabidopsis Flowering Time Gene Regulatory Network. Felipe Leal Valentim, Simon van Mourik, David Posé, Min C. Kim, Markus Schmid, Roeland C. H. J. van Ham, Marco Busscher, Gabino F. Sanchez-Perez, Jaap Molenaar, Gerco C. Angenent, Richard G. H. Immink, Aalt D. J. van Dijk. PLoS One. 10(2):e0116973. doi:10.1371/journal. pone.0116973.

Control of flowering by ambient temperature. Giovanna Capovilla, Markus Schmid*, David Posé*. Journal of Experimental Botany. 66(1):59-69. doi: 10.1093/jxb/eru416.

2013

Temperature-dependent regulation of flowering by antagonistic FLM variants. David Posé, Leonie Verhage, Felix Ott, Levi Yant, Johannes Mathieu, Gerco C. Angenent, Richard G. H. Immink, Markus Schmid. Nature. 503(7476):414-417. doi: 10.1038/nature12633.

Regulation of Temperature-Responsive Flowering by MADS-Box Transcription Factor Repressors. Jeong Hwan Lee, Hak-Seung Ryu, Kyung Sook Chung, David Posé, Soonkap Kim, Markus Schmid, Ji Hoon Ahn. Science. 342(6158):628-632. doi: 10.1126/science.1241097.

The SUD1 Gene Encodes a Putative E3 Ubiquitin Ligase and Is a Positive Regulator of 3-Hydroxy-3-Methylglutaryl Coenzyme A Reductase Activity in Arabidopsis. Verónica G. Doblas, Vítor Amorim-Silva, David Posé, Abel Rosado, Alicia Esteban, Montserrat Arró, Herlander Azevedo, Aureliano Bombarely, Omar Borsani, Victoriano Valpuesta, Albert Ferrer, Rui M. Tavares, Miguel A. Botella. The Plant Cell. 25(2):728-743. doi: 10.1105/tpc.112.108696.

2012

Characterization of SOC1’s Central Role in Flowering by the Identification of Its Upstream and Downstream Regulators. Richard G.H. Immink*, David Posé*, Silvia Ferrario, Felix Ott, Kerstin Kaufmann, Felipe Leal Valentim, Stefan de Folter, Froukje van der Wal, Aalt D.J. van Dijk, Markus Schmid, Gerco C. Angenent. Plant Physiology. 160(1):433-449. doi: 10.1104/pp.112.202614.

Synteny-based mapping-by-sequencing enabled by targeted enrichment. Vinicius C. Galvão, Karl J.V. Nordström, Christa Lanz, Patric Sulz, Johannes Mathieu, David Posé, Markus Schmid, Detlef Weigel, Korbinian Schneeberger. The Plant Journal. 71(3):517-26. doi: 10.1111/j.1365-313X.2012.04993.x.

The Arabidopsis TETRATRICOPEPTIDE THIOREDOXIN-LIKE Gene Family Is Required for Osmotic Stress Tolerance and Male Sporogenesis. Naoufal Lakhssassi, Verónica G. Doblas, Abel Rosado, Alicia Esteban del Valle, David Posé, Antonio J. Jimenez, Araceli G. Castillo, Victoriano Valpuesta, Omar Borsani, Miguel A. Botella. Plant Physiology. 158(3):1252-66. doi: 10.1104/pp.111.188920.

The end of innocence: flowering networks explode in complexity. David Posé, Levi Yant, Markus Schmid. Current Opinion in Plant Biology. 15(1):45-50. doi: 10.1016/j.pbi.2011.09.002.

2011

Prediction of Regulatory Interactions from Genome Sequences Using a Biophysical Model for the Arabidopsis LEAFY Transcription Factor. Edwige Moyroud, Eugenio Gómez Minguet, Felix Ott, Levi Yant, David Posé, Marie Monniaux, Sandrine Blanchet, Olivier Bastien, Emmanuel Thévenon, Detlef Weigel, Markus Schmid, François Parcy. The Plant Cell. 23(4):1293-306. doi: 10.1105/tpc.111.083329.

2009

Analysis of the Arabidopsis dry2/sqe1-5 mutant suggests a role for sterols in signaling. David Posé, Miguel A. Botella. Plant Signaling and Behavior. 4(9):873-874. doi: 10.4161/psb.4.9.9425.

Identification of the Arabidopsis dry2/sqe1-5 mutant reveals a central role for sterols in drought tolerance and regulation of reactive oxygen species. David Posé, Itziar Castanedo, Omar Borsani, Benjamín Nieto, Abel Rosado, Ludivine Taconnat, Albert Ferrer, Liam Dolan, Victoriano Valpuesta, Miguel A. Botella. The Plant Journal. 59(1):63-76. doi: 10.1111/j.1365-313X.2009.03849.x.

Carmen Martín-Pizarro

2019

Transcriptomic analysis in strawberry fruits reveals active auxin biosynthesis and signaling in the ripe receptacle. Elizabeth Estrada-Johnson, Fabiana Csukasi, Carmen M. Pizarro, José G. Vallarino, Yulia Kiryakova, Amalia Vioque, Javier Brumos, Nieves Medina-Escobar, Miguel A. Botella, José M. Alonso, Alisdair R. Fernie, José F. Sánchez-Sevilla, Sonia Osorio, Victoriano Valpuesta. Frontiers in Plant Science. 8:889. doi: 10.3389/fpls.2017.00889.

2016

Genetic architecture of nonadditive inheritance in Arabidopsis thaliana hybrids. Danelle K. Seymour, Eunyoung Chae, Dominik G. Grimm, Carmen Martín Pizarro, Anette Habring-Müller, François Vasseur, Barbara Rakitsch, Karsten M. Borgwardt, Daniel Koenig, Detlef Weigel. PNAS. 113(46):E7317-E7326. doi: 10.1073/pnas.1615268113.

2014

Species-wide genetic incompatibility analysis identifies immune genes as hot spots of deleterious epistasis. Eunyoung Chae, Kirsten Bomblies, Sang-Tae Kim, Darya Karelina, Maricris Zaidem, Stephan Ossowski, Carmen Martín-Pizarro, Roosa A.E. Laitinen, Beth A. Rowan, Hezi Tenenboim, Sarah Lechner, Monika Demar, Anette Habring-Müller, Christa Lanz, Gunnar Rätsch, Detlef Weigel. Cell. 159(6):1341-51. doi: 10.1016/j.cell.2014.10.049.

 2009

Fruit yield and quality of strawberry plants transformed with a fruit specific strawberry pectate lyase gene. Sabry M. Youssef, Silvia Jiménez-Bermúdez, M. Luz Bellido, Carmen Martín-Pizarro, Marta Barceló, Samia Abdallah Abdal-Aziz, José L. Caballero, José M. López-Aranda, Fernando Pliego-Alfaro, Juan Muñoz, Miguel A. Quesada, José A. Mercado. Scientia Horticulturae. 119:120-125. doi: 10.1016/j.scienta.2008.07.011.

2007

Evaluation of tolerance of colletotrichum acutatum in strawberry plants transformed with trichoderma-derived genes. J.A. Mercado, C. Martín-Pizarro, L. Pascual, M.A. Quesada, F. Pliego-Alfaro. Acta Horticulturae. 738:383-388. doi: 10.17660/ActaHortic.2007.738.46.

Transgenic Strawberry: Current Status and Future Perspectives. Miguel A. Quesada, Carmen Martín-Pizarro, Juan A. García-Gago, Sara Posé, Nieves Santiago, Rafael Sesmero, Fernando Pliego-Alfaro, José A. Mercado. Transgenic Plant Journal. 1(2):280-288.

María Urrutia

2021

Maize metabolome and proteome responses to controlled cold stress partly mimic early-sowing effects in the field and differ from those of Arabidopsis. María Urrutia, Melisande Blein-Nicolas, Sylvain Prigent, Stéphane Bernillon, Catherine Deborde, Thierry Balliau, Mickaël Maucourt, Daniel Jacob, Patricia Ballias, Camille Bénard, Hélène Sellier, Yves Gibon, Catherine Giauffret, Michel Zivy, Annick Moing. Plant, Cell & Environment. 44(5): 1504-1521. doi: 10.1111/pce.13993.

2019

Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers. Olivier Fernandez, María Urrutia Rosauro, Thierry Berton, Stéphane Bernillon, Catherine Deborde, Daniel Jacob, Mickaël Maucourt, Pierre Maury, Harold Duruflé, Yves Gibon, Nicolas Langlade, Annick Moing.

Metabolomics. 15 – 56. doi:10.1007/s11306-019-1515-4.

2018

Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding. Nadia Lamari, Vanessa Zhendre, María Urrutia, Stéphane Bernillon, Mickäel Maucourt, Catherine Deborde, Duyene Prodhome, Daniel Jacob, Patricia Ballias, Dominique Rolin, Hélène Sellier, Dominique Rabier, Yves Gibon, Catherine Giauffret, Annick Moing. Metabolomics. 14(10):132. doi: 10.1007/s11306-018-1427-8.

Fruit Quality and the Use of Near-Isogenic Lines for Functional Characterization in Fragaria vesca. María Urrutia, Amparo Monfort. The Genomes of Rosaceous Berries and Their Wild Relatives. Book chapter 5, pp. 49 – 60. Springer International Publishing. doi: 10.1007/978-3-319-76020-9_5.

2017

Genetic analysis of the wild strawberry (Fragaria vesca) volatile composition. Maria Urrutia, José Luis Rambla, Konstantinos Alexiou, Antonio Granell, Amparo Monfort. Plant Physiology and Biochemistry 121:99-117. doi: 10.1016/j.plaphy.2017.10.015.

2016

Genetic dissection of the (poly)phenol profile of diploid strawberry (Fragaria vesca) fruits using a NIL collection. Maria Urrutia, Wilfried Schwab, Thommas Hoffmann, Amparo Monfort. Plant Science. 242:151-168. doi: 10.1016/j.plantsci.2015.07.019.

Fortune telling: metabolic markers of plant performance. Olivier Fernández, Maria Urrutia, Stephane Bernillon, Catherine Giauffret, François Tardieu, Jacques Le Gouis, Nicolas Langlade. Alain Charcosset, Annick Moing, Yves Gibon. Metabolomics. 12(10):158. doi: 10.1007/s11306-016-1099-1.

2015

A near-isogenic line (NIL) collection in diploid strawberry and its use in the genetic analysis of morphologic, phenotypic and nutritional characters. Maria Urrutia, Julio Bonet, Pere Arús, Amparo Monfort. Theoretical and Applied Genetics. 128:1261-1275. doi: 10.1007/s00122-015-2503-3.

Victoriano Meco

2020

The Salt Sensitivity Induced by Disruption of Cell Wall-Associated Kinase 1 (SlWAK1) Tomato Gene Is Linked to Altered Osmotic and Metabolic Homeostasis. Victoriano Meco, Isabel Egea, Ana Ortíz-Atienza, Stéphanie Drevensek, Elisabeth Esch, Fernando J. Yuste-Lisbona, Fredy Barneche, Wim Vriezen, María C. Bolarin, Rafael Lozano, Francisco B. Flores. International Journal of Molecular Science. 21:6308. doi:10.3390/ijms21176308.

2019

Identification and characterisation of the tomato parthenocarpic mutant high fruit set under stress (hfs) exhibiting high productivity under heat and salt stress. Victoriano Meco, Isabel Egea, Irene Albaladejo, Juan F. Campos, Belen Morales, Ana Ortíz‐Atienza, Carmen Capel, Trinidad Angosto, María C. Bolarín, Francisco B. Flores. Annals of Applied Biology. 174:166-178. doi: 10.1111/aab.12486.

2018

The drought-tolerant Solanum pennellii regulates leaf water loss and induces genes involved in amino acid and ethylene/jasmonate metabolism under dehydration. Isabel Egea, Irene Albaladejo, Victoriano Meco, Belén Morales, Ángel Sevilla, María C. Bolarin, Francisco B. Flores. Scientific Reports. 8: 2791. doi:10.1038/s41598-018-21187-2.

2017

Unravelling the strategies used by the wild tomato species Solanum pennellii to confront salt stress: From leaf anatomical adaptations to molecular responses. Irene Albaladejo*, Victoriano Meco*, Felix Plasencia, Francisco B. Flores, María C. Bolarin, Isabel Egea. Environmental and Experimental Botany. 135: 1-12. doi: 10.1016/j.envexpbot.2016.12.003

2015

Different strategies used by domesticated tomato and wild-related species to confront salt stress. Irene Albaladejo, Felix A. Plasencia, Victoriano Meco, Isabel Egea, Maria C. Bolarin, Francisco B. Flores. Procedia Environmental Science. 29: 91-92. doi: 10.1016/j.proenv.2015.07.175.

2014

Requirement for Pectin Methyl Esterase and Preference for Fragmented over Native Pectins for Wall-associated Kinase-activated, EDS1/PAD4-dependent Stress Response in Arabidopsis. Bruce D. Kohorn, Susan L. Kohorn, Nicholas J. Saba, and Victoriano Meco Martinez. Journal of Biological Chemistry. 289 (27): 18978-18986. doi: 10.1074/jbc.M114.567545.

2012

A novel method for phosphoprotein extraction from macroalgae. María Lopéz-Parages, Juan M. Capasso, Victoriano Meco, Carlos Jiménez. Botanica Marina. 55: 261-267. doi: 10.1515/bot-2011-0051.